<?xml version='1.0' encoding='UTF-8'?><?xml-stylesheet href="http://www.blogger.com/styles/atom.css" type="text/css"?><feed xmlns='http://www.w3.org/2005/Atom' xmlns:openSearch='http://a9.com/-/spec/opensearchrss/1.0/' xmlns:georss='http://www.georss.org/georss' xmlns:gd='http://schemas.google.com/g/2005' xmlns:thr='http://purl.org/syndication/thread/1.0'><id>tag:blogger.com,1999:blog-7269485350488615662</id><updated>2012-02-16T09:48:16.762-08:00</updated><title type='text'>Eckert Lab</title><subtitle type='html'>Plant evolutionary genomics at Virginia Commonwealth University</subtitle><link rel='http://schemas.google.com/g/2005#feed' type='application/atom+xml' href='http://eckertlab.blogspot.com/feeds/posts/default'/><link rel='self' type='application/atom+xml' href='http://www.blogger.com/feeds/7269485350488615662/posts/default?max-results=100'/><link rel='alternate' type='text/html' href='http://eckertlab.blogspot.com/'/><link rel='hub' href='http://pubsubhubbub.appspot.com/'/><author><name>Andrew Eckert</name><uri>http://www.blogger.com/profile/08363955942155504697</uri><email>noreply@blogger.com</email><gd:image rel='http://schemas.google.com/g/2005#thumbnail' width='32' height='24' src='http://1.bp.blogspot.com/-hpszPwAMSYw/TkQXKYtplRI/AAAAAAAAATo/DC_d2KXEr6g/s220/Eckert_pic.jpg'/></author><generator version='7.00' uri='http://www.blogger.com'>Blogger</generator><openSearch:totalResults>3</openSearch:totalResults><openSearch:startIndex>1</openSearch:startIndex><openSearch:itemsPerPage>100</openSearch:itemsPerPage><entry><id>tag:blogger.com,1999:blog-7269485350488615662.post-1404326612383330486</id><published>2012-01-23T13:37:00.000-08:00</published><updated>2012-01-27T05:27:11.254-08:00</updated><title type='text'>New paper at New Phytologist (01/23/2012)</title><content type='html'>&lt;div style="font-family: Arial,Helvetica,sans-serif;"&gt;&lt;br /&gt;&lt;span style="font-size: large;"&gt;   &lt;/span&gt;          &lt;style&gt;&lt;!-- /* Font Definitions */@font-face {font-family:"ＭＳ 明朝"; mso-font-charset:78; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1791491579 18 0 131231 0;}@font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:Cambria; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1073743103 0 0 415 0;} /* Style Definitions */p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0in; margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:12.0pt; font-family:Cambria; mso-ascii-font-family:Cambria; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:"ＭＳ 明朝"; mso-fareast-theme-font:minor-fareast; mso-hansi-font-family:Cambria; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-family:Cambria; mso-ascii-font-family:Cambria; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:"ＭＳ 明朝"; mso-fareast-theme-font:minor-fareast; mso-hansi-font-family:Cambria; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi;}@page WordSection1 {size:8.5in 11.0in; margin:1.0in 1.25in 1.0in 1.25in; mso-header-margin:.5in; mso-footer-margin:.5in; mso-paper-source:0;}div.WordSection1 {page:WordSection1;}--&gt;&lt;/style&gt;       &lt;/div&gt;&lt;div class="MsoNormal" style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;br /&gt;&lt;div style="text-align: right;"&gt;&lt;a href="http://3.bp.blogspot.com/-KSjcK89gHXs/Tx3THU9F_MI/AAAAAAAABBU/OdXulZSAc40/s1600/PC_classification.png" imageanchor="1" style="clear: right; float: right; margin-bottom: 1em; margin-left: 1em;"&gt;&lt;img border="0" height="234" src="http://3.bp.blogspot.com/-KSjcK89gHXs/Tx3THU9F_MI/AAAAAAAABBU/OdXulZSAc40/s320/PC_classification.png" width="320" /&gt;&lt;/a&gt;&lt;/div&gt;&lt;span style="font-size: large;"&gt;We have a new paper out at &lt;i&gt;New Phytologist&lt;/i&gt;. It is posted in the Online Early section and can be accessed &lt;a href="http://onlinelibrary.wiley.com/doi/10.1111/j.1469-8137.2011.03976.x/abstract"&gt;here&lt;/a&gt;. Data for this paper can be accessed &lt;a href="http://eckertdata.blogspot.com/"&gt;here&lt;/a&gt;. The premise of the study was to associate variation at 3,563 SNPs to variation at 292 primary metabolites for loblolly pine (&lt;i&gt;Pinus taeda&lt;/i&gt; L.). In brief, 28 single locus associations were detected, representing 24 and 20 unique SNPs and metabolites, respectively. Multilocus Bayesian mixed linear models identified 2,998 additional associations for a total of 1,617 unique SNPs associated to 255 metabolites. These SNPs explained sizeable fractions of metabolite heritabilities when considered jointly (56.6% on average).&lt;/span&gt;&lt;/div&gt;&lt;div class="blogger-post-footer"&gt;&lt;img width='1' height='1' src='https://blogger.googleusercontent.com/tracker/7269485350488615662-1404326612383330486?l=eckertlab.blogspot.com' alt='' /&gt;&lt;/div&gt;</content><link rel='edit' type='application/atom+xml' href='http://www.blogger.com/feeds/7269485350488615662/posts/default/1404326612383330486'/><link rel='self' type='application/atom+xml' href='http://www.blogger.com/feeds/7269485350488615662/posts/default/1404326612383330486'/><link rel='alternate' type='text/html' href='http://eckertlab.blogspot.com/2012/01/new-paper-at-new-phytologist-we-have.html' title='&lt;b&gt;New paper at &lt;i&gt;New Phytologist&lt;/i&gt; (01/23/2012)&lt;/b&gt;'/><author><name>Andrew Eckert</name><uri>http://www.blogger.com/profile/08363955942155504697</uri><email>noreply@blogger.com</email><gd:image rel='http://schemas.google.com/g/2005#thumbnail' width='32' height='24' src='http://1.bp.blogspot.com/-hpszPwAMSYw/TkQXKYtplRI/AAAAAAAAATo/DC_d2KXEr6g/s220/Eckert_pic.jpg'/></author><media:thumbnail xmlns:media='http://search.yahoo.com/mrss/' url='http://3.bp.blogspot.com/-KSjcK89gHXs/Tx3THU9F_MI/AAAAAAAABBU/OdXulZSAc40/s72-c/PC_classification.png' height='72' width='72'/></entry><entry><id>tag:blogger.com,1999:blog-7269485350488615662.post-774198361244967036</id><published>2011-10-29T12:27:00.000-07:00</published><updated>2011-11-14T07:55:31.646-08:00</updated><title type='text'>Graduate student needed (10/29/2011)</title><content type='html'>&lt;div style="text-align: left;"&gt;&lt;br /&gt;&lt;br /&gt;&lt;style&gt;&lt;!-- /* Font Definitions */@font-face {font-family:"ＭＳ 明朝"; mso-font-charset:78; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1791491579 18 0 131231 0;}@font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:Cambria; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1073743103 0 0 415 0;} /* Style Definitions */p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0in; margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:12.0pt; font-family:Cambria; mso-ascii-font-family:Cambria; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:"ＭＳ 明朝"; mso-fareast-theme-font:minor-fareast; mso-hansi-font-family:Cambria; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-family:Cambria; mso-ascii-font-family:Cambria; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:"ＭＳ 明朝"; mso-fareast-theme-font:minor-fareast; mso-hansi-font-family:Cambria; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi;}@page WordSection1 {size:8.5in 11.0in; margin:1.0in 1.25in 1.0in 1.25in; mso-header-margin:.5in; mso-footer-margin:.5in; mso-paper-source:0;}div.WordSection1 {page:WordSection1;}--&gt;&lt;/style&gt;     &lt;/div&gt;&lt;div class="separator" style="clear: both; font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;/div&gt;&lt;div class="MsoNormal" style="text-align: justify;"&gt;&lt;a href="http://4.bp.blogspot.com/-FGPYOPMsaEY/TqxUsw48ezI/AAAAAAAAA1c/REbdflxtSQw/s1600/more_sunset_James.jpg" imageanchor="1" style="clear: right; float: right; margin-bottom: 1em; margin-left: 1em;"&gt;&lt;img border="0" height="200" src="http://4.bp.blogspot.com/-FGPYOPMsaEY/TqxUsw48ezI/AAAAAAAAA1c/REbdflxtSQw/s200/more_sunset_James.jpg" width="150" /&gt;&lt;/a&gt;&lt;a href="http://4.bp.blogspot.com/-hBK-FsnyR9I/TqxTipIxDGI/AAAAAAAAA1U/UDEiN0PbklM/s1600/sunset_James_walk.jpg" imageanchor="1" style="clear: right; float: right; margin-bottom: 1em; margin-left: 1em;"&gt;&lt;img border="0" height="200" src="http://4.bp.blogspot.com/-hBK-FsnyR9I/TqxTipIxDGI/AAAAAAAAA1U/UDEiN0PbklM/s200/sunset_James_walk.jpg" width="150" /&gt;&lt;/a&gt;&lt;span style="font-family: Arial,Helvetica,sans-serif; font-size: large;"&gt;The laboratories of Andrew Eckert and Chris Gough, located in the &lt;a href="http://www.has.vcu.edu/bio/"&gt;&lt;span style="color: #990000; text-decoration: none;"&gt;Department of Biology&lt;/span&gt;&lt;/a&gt; at &lt;a href="http://www.vcu.edu/"&gt;&lt;span style="color: #990000; text-decoration: none;"&gt;Virginia Commonwealth University&lt;/span&gt;&lt;/a&gt;, are recruiting an M.S. level graduate student for a research project examining the genetic basis of photosynthesis and growth related traits in loblolly pine. Our preference is for a student who would ideally begin during the summer of 2012. Work would involve phenotyping hundreds of loblolly pines established in a common garden and carrying out statistical tests for associations between genetic markers and these traits. This interdisciplinary project would be a nice introduction to tree physiology, quantitative and population genetics and association mapping of complex phenotypes. More information about the types of research conducted by the Eckert or Gough labs can be found at &lt;a href="http://ajeckert.blogspot.com/"&gt;&lt;span style="color: #990000; text-decoration: none;"&gt;http://ajeckert.blogspot.com/&lt;/span&gt;&lt;/a&gt; and &lt;a href="http://www.people.vcu.edu/%7Ecmgough/"&gt;&lt;span style="color: #990000; text-decoration: none;"&gt;http://www.people.vcu.edu/~cmgough/&lt;/span&gt;&lt;/a&gt;. To apply please send the following to Dr. Andrew Eckert (&lt;a href="mailto:aeckert2@vcu.edu"&gt;&lt;span style="color: #990000; text-decoration: none;"&gt;aeckert2@vcu.edu&lt;/span&gt;&lt;/a&gt;) by December 1st, 2011:&lt;/span&gt;&lt;/div&gt;&lt;div class="MsoNormal" style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;span style="font-size: large;"&gt;&lt;br /&gt;&lt;/span&gt;&lt;/div&gt;&lt;div style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;span style="font-size: large;"&gt;  &lt;/span&gt;&lt;/div&gt;&lt;div class="MsoNormal" style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;span style="font-size: large;"&gt;&amp;nbsp;&amp;nbsp;&amp;nbsp;&amp;nbsp; (1) A curriculum vitae&lt;/span&gt;&lt;/div&gt;&lt;div style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;span style="font-size: large;"&gt;&lt;br /&gt;&lt;/span&gt;&lt;/div&gt;&lt;div class="MsoNormal" style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;span style="font-size: large;"&gt;&amp;nbsp;&amp;nbsp;&amp;nbsp;&amp;nbsp; (2) A brief description of your academic and scientific goals&lt;/span&gt;&lt;/div&gt;&lt;div style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;span style="font-size: large;"&gt;&lt;br /&gt;&lt;/span&gt;&lt;/div&gt;&lt;div class="MsoNormal" style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;span style="font-size: large;"&gt;&amp;nbsp;&amp;nbsp;&amp;nbsp;&amp;nbsp; (3) Contact information for at least three references&lt;/span&gt;&lt;/div&gt;&lt;div style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;span style="font-size: large;"&gt;&lt;br /&gt;&lt;/span&gt;&lt;/div&gt;&lt;div style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;/div&gt;&lt;div class="separator" style="clear: both; font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;/div&gt;&lt;div class="MsoNormal" style="font-family: Arial,Helvetica,sans-serif; text-align: justify;"&gt;&lt;span style="font-size: large;"&gt;Please visit the following webpage for information about requirements for the M.S. program at VCU: &lt;a href="http://www.has.vcu.edu/bio/graduate/ms_admissions.html"&gt;&lt;span style="color: #990000; text-decoration: none;"&gt;http://www.has.vcu.edu/bio/graduate/ms_admissions.html&lt;/span&gt;&lt;/a&gt;, which has an application deadline of January 15th, 2012. &lt;/span&gt;&lt;/div&gt;&lt;div class="blogger-post-footer"&gt;&lt;img width='1' height='1' src='https://blogger.googleusercontent.com/tracker/7269485350488615662-774198361244967036?l=eckertlab.blogspot.com' alt='' /&gt;&lt;/div&gt;</content><link rel='edit' type='application/atom+xml' href='http://www.blogger.com/feeds/7269485350488615662/posts/default/774198361244967036'/><link rel='self' type='application/atom+xml' href='http://www.blogger.com/feeds/7269485350488615662/posts/default/774198361244967036'/><link rel='alternate' type='text/html' href='http://eckertlab.blogspot.com/2011/10/graduate-student-needed-10292011.html' title='&lt;b&gt;Graduate student needed (10/29/2011)&lt;/b&gt;'/><author><name>Andrew Eckert</name><uri>http://www.blogger.com/profile/08363955942155504697</uri><email>noreply@blogger.com</email><gd:image rel='http://schemas.google.com/g/2005#thumbnail' width='32' height='24' src='http://1.bp.blogspot.com/-hpszPwAMSYw/TkQXKYtplRI/AAAAAAAAATo/DC_d2KXEr6g/s220/Eckert_pic.jpg'/></author><media:thumbnail xmlns:media='http://search.yahoo.com/mrss/' url='http://4.bp.blogspot.com/-FGPYOPMsaEY/TqxUsw48ezI/AAAAAAAAA1c/REbdflxtSQw/s72-c/more_sunset_James.jpg' height='72' width='72'/></entry><entry><id>tag:blogger.com,1999:blog-7269485350488615662.post-8129989806774699721</id><published>2011-10-27T09:30:00.000-07:00</published><updated>2011-11-14T07:56:45.978-08:00</updated><title type='text'>The Eckert Lab Nears Completion (10/27/2011)</title><content type='html'>&lt;table cellpadding="0" cellspacing="0" class="tr-caption-container" style="float: right; margin-left: 1em; text-align: right;"&gt;&lt;tbody&gt;&lt;tr&gt;&lt;td style="text-align: center;"&gt;&lt;a href="http://4.bp.blogspot.com/-CqAoEU3S5og/TqmGXyiZlZI/AAAAAAAAAz4/Zv__BA1VdGg/s1600/lab.JPG" imageanchor="1" style="clear: right; margin-bottom: 1em; margin-left: auto; margin-right: auto;"&gt;&lt;img border="0" height="150" src="http://4.bp.blogspot.com/-CqAoEU3S5og/TqmGXyiZlZI/AAAAAAAAAz4/Zv__BA1VdGg/s200/lab.JPG" width="200" /&gt;&lt;/a&gt;&lt;/td&gt;&lt;/tr&gt;&lt;tr&gt;&lt;td class="tr-caption" style="text-align: center;"&gt;What a beautiful workspace!&lt;/td&gt;&lt;/tr&gt;&lt;/tbody&gt;&lt;/table&gt;&lt;div style="text-align: justify;"&gt;&lt;br /&gt;&lt;br /&gt;&lt;span style="font-size: large;"&gt;The Eckert lab is nearing completion and should be fully functional by the end of the year. It is equipped for basic molecular biology work with nucleic acids and also includes several powerful computing stations (iMACs).&amp;nbsp;&lt;/span&gt;&lt;br /&gt;&lt;br /&gt;&lt;span style="font-size: large;"&gt;Now, I just need to fill it with students and post-docs. Please inquire if you have an interest in joining my lab (&lt;a href="mailto:aeckert2@vcu.edu"&gt;&lt;span style="color: #990000; text-decoration: none;"&gt;aeckert2@vcu.edu&lt;/span&gt;&lt;/a&gt;).&lt;/span&gt;&lt;/div&gt;&lt;div class="blogger-post-footer"&gt;&lt;img width='1' height='1' src='https://blogger.googleusercontent.com/tracker/7269485350488615662-8129989806774699721?l=eckertlab.blogspot.com' alt='' /&gt;&lt;/div&gt;</content><link rel='edit' type='application/atom+xml' href='http://www.blogger.com/feeds/7269485350488615662/posts/default/8129989806774699721'/><link rel='self' type='application/atom+xml' href='http://www.blogger.com/feeds/7269485350488615662/posts/default/8129989806774699721'/><link rel='alternate' type='text/html' href='http://eckertlab.blogspot.com/2011/10/eckert-lab-nears-completion.html' title='&lt;b&gt;The Eckert Lab Nears Completion (10/27/2011)&lt;/b&gt;'/><author><name>Andrew Eckert</name><uri>http://www.blogger.com/profile/08363955942155504697</uri><email>noreply@blogger.com</email><gd:image rel='http://schemas.google.com/g/2005#thumbnail' width='32' height='24' src='http://1.bp.blogspot.com/-hpszPwAMSYw/TkQXKYtplRI/AAAAAAAAATo/DC_d2KXEr6g/s220/Eckert_pic.jpg'/></author><media:thumbnail xmlns:media='http://search.yahoo.com/mrss/' url='http://4.bp.blogspot.com/-CqAoEU3S5og/TqmGXyiZlZI/AAAAAAAAAz4/Zv__BA1VdGg/s72-c/lab.JPG' height='72' width='72'/></entry></feed>
